hlydecker/ucsc-genome-mcp

Overview

An MCP server for interacting with the UCSC Genome Browser API, enabling discovery of genomes, chromosomes, and related data.

Capabilities

• • stdio transport support
• • database integration
• • mcp client integration

Best For

MCP server to interact with UCSC Genome Browser API for genome and chromosome discovery.

Decision Snapshot

• • GitHub stars: 2
• • Forks: 2
• • Source provenance count: 1
• • Last seen: 4/15/2026
• • Published: 3/15/2026

Installation / Setup

# Clone or download the repository && cd ucsc-genome-mcp-server && # Install in development mode && pip install -e .

This is an MCP Find-authored example config generated from strong evidence.

Final parameters should follow the tool's official setup documentation.

{
  "mcpServers": {
    "ucsc-genome-mcp": {
      "command": "python",
      "args": [
        "ucsc_genome_mcp_server.py"
      ]
    }
  }
}

Usage

python ucsc_genome_mcp_server.py

Features

• • stdio transport support
• • database integration
• • mcp client integration
• • Capability signal: stdio transport support
• • Capability signal: database integration
• • Capability signal: mcp client integration

Use Cases

• • Capability coverage: stdio transport support; database integration.

Supported Clients / Integrations

• • stdio transport support
• • database integration
• • mcp client integration

Prompt Examples

Notes / Requirements

• • Primary language: Python
• • License: MIT
• • Parser coverage score: 1.00
• • Source feeds: Awesome MCP Servers (punkpeye)
• • Topic cluster: general

Official Links

• Website
• Repository

Source Information

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